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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs58262255 chr5:170821899 T/C CLEC2D chr12:9817565-9852151:+ -0.18 -5.92 6.03E-9 Box Plot
THCA rs58283816 chr8:11192551 G/C SGK223 chr8:8175258-8244008:- -0.35 -6.6 1.12E-10 Box Plot
THCA rs582866 chr11:77597567 C/T INTS4L1 chr7:64601603-64694600:+ 0.44 7.89 2.08E-14 Box Plot
THCA rs58319865 chr8:11790294 CG/C SGK223 chr8:8175258-8244008:- 0.37 6.67 7.24E-11 Box Plot
THCA rs58325983 chr8:11788663 G/A SGK223 chr8:8175258-8244008:- -0.45 -8.43 3.96E-16 Box Plot
THCA rs5832913 chr2:101063413 AAC/A LOC285359 chr3:101431278-101432259:+ 0.35 5.9 6.72E-9 Box Plot
THCA rs5832915 chr2:101085846 G/GA LOC285359 chr3:101431278-101432259:+ 0.35 6.63 8.9E-11 Box Plot
THCA rs5832920 chr2:101136571 T/TA LOC285359 chr3:101431278-101432259:+ 0.37 8.45 3.56E-16 Box Plot
THCA rs5832922 chr2:101173683 G/GTACT LOC285359 chr3:101431278-101432259:+ 0.39 9 5.49E-18 Box Plot
THCA rs5833445 chr2:113078945 GT/GTT RGPD5 chr2:110550335-110615272:+ -0.47 -6.89 1.72E-11 Box Plot
THCA rs58342670 chr16:21680713 C/A BDNF chr11:27676440-27743605:- 0.45 6.21 1.18E-9 Box Plot
THCA rs5834291 chr2:132187352 G/GA CCDC74B chr2:130896860-130902707:- 0.38 6.93 1.4E-11 Box Plot
THCA rs58353005 chr1:26540597 G/A GLRX chr5:95087023-95158709:- 0.31 5.91 6.46E-9 Box Plot
THCA rs583792 chr17:18288038 C/T LOC162632 chr17:16614993-16707819:+ 0.46 8.02 8.27E-15 Box Plot
THCA rs58406226 chr1:61464505 G/A PNLIP chr10:118305443-118327367:+ 0.17 5.87 7.99E-9 Box Plot